Carnation DB

Dca48339.1

Annotation

6-exons
f-1
sp|B9HWD8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_566575#GO:0016787;GO:0006541#1F1P0C
AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr5:15256383-15258474 FORWARD LENGTH=436
Repeat List (scaffold5952)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48339.1	350	501	504	11.9	152	40	5e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9HWD8_POPTR	280	421	430	33.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48339.1	350	501	504	14.68	152	49	2e-30
Target_name	Start	End	Length	Cov(%)
AT5G38200.1	282	426	436	33.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5952	Augustus	mRNA	17224	21910	.	-	.	ID=Dca48339.1;Parent=Dca48339
scaffold5952	Augustus	exon	17224	17469	.	-	.	ID=Dca48339.1.exon1;Parent=Dca48339.1
scaffold5952	Augustus	exon	18190	18411	.	-	.	ID=Dca48339.1.exon2;Parent=Dca48339.1
scaffold5952	Augustus	exon	20204	20425	.	-	.	ID=Dca48339.1.exon3;Parent=Dca48339.1
scaffold5952	Augustus	exon	20551	20970	.	-	.	ID=Dca48339.1.exon4;Parent=Dca48339.1
scaffold5952	Augustus	exon	21263	21582	.	-	.	ID=Dca48339.1.exon5;Parent=Dca48339.1
scaffold5952	Augustus	exon	21826	21910	.	-	.	ID=Dca48339.1.exon6;Parent=Dca48339.1