Carnation DB

Dca48358.1

Annotation

14-exons
f-1
sp|G5DWT1_SILLA#Mannosyl-oligosaccharide 1,2-alpha-mannosidase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0016020;GO:0005509;GO:0004571#2F0P1C
Repeat List (scaffold596)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48358.1	9	74	75	44	66	50	1e-06
Target_name	Start	End	Length	Cov(%)
sp\|F6GYP3_VITVI	27	91	105	61.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48358.1	1	558	559	78.35	558	79	0
Target_name	Start	End	Length	Cov(%)
AT1G51590.1	1	556	560	99.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold596	Augustus	mRNA	17309	22605	.	+	.	ID=Dca48358.1;Parent=Dca48358
scaffold596	Augustus	exon	17309	17461	.	+	.	ID=Dca48358.1.exon1;Parent=Dca48358.1
scaffold596	Augustus	exon	18836	18883	.	+	.	ID=Dca48358.1.exon2;Parent=Dca48358.1
scaffold596	Augustus	exon	19187	19351	.	+	.	ID=Dca48358.1.exon3;Parent=Dca48358.1
scaffold596	Augustus	exon	19539	19651	.	+	.	ID=Dca48358.1.exon4;Parent=Dca48358.1
scaffold596	Augustus	exon	19810	19875	.	+	.	ID=Dca48358.1.exon5;Parent=Dca48358.1
scaffold596	Augustus	exon	19971	20142	.	+	.	ID=Dca48358.1.exon6;Parent=Dca48358.1
scaffold596	Augustus	exon	20249	20338	.	+	.	ID=Dca48358.1.exon7;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	20501	20625	.	+	.	ID=Dca48358.1.exon8;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	20743	20808	.	+	.	ID=Dca48358.1.exon9;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	21171	21279	.	+	.	ID=Dca48358.1.exon10;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	21372	21470	.	+	.	ID=Dca48358.1.exon11;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	21557	21637	.	+	.	ID=Dca48358.1.exon12;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	21726	21896	.	+	.	ID=Dca48358.1.exon13;Parent=Dca48358.1
scaffold596	Augus-PASA	exon	22384	22605	.	+	.	ID=Dca48358.1.exon14;Parent=Dca48358.1