Carnation DB

Dca48453.1

Annotation

5-exons
f-1
sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold598)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48453.1	1	1332	1332	52.7	1332	50	0
Target_name	Start	End	Length	Cov(%)
sp\|A5B919_VITVI	46	1450	1450	96.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48453.1	302	1319	1332	26.12	1018	32	1e-141
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	377	1386	1401	72.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold598	Augustus	mRNA	113644	118768	.	-	.	ID=Dca48453.1;Parent=Dca48453
scaffold598	Augustus	exon	113644	113912	.	-	.	ID=Dca48453.1.exon1;Parent=Dca48453.1
scaffold598	Augustus	exon	114063	117037	.	-	.	ID=Dca48453.1.exon2;Parent=Dca48453.1
scaffold598	Augustus	exon	117139	117583	.	-	.	ID=Dca48453.1.exon3;Parent=Dca48453.1
scaffold598	Augustus	exon	118146	118299	.	-	.	ID=Dca48453.1.exon4;Parent=Dca48453.1
scaffold598	Augustus	exon	118613	118768	.	-	.	ID=Dca48453.1.exon5;Parent=Dca48453.1