Dca485.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold10086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca485.1 |
79 |
891 |
891 |
38.27 |
813 |
38 |
7e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
817 |
1717 |
46.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca485.1 |
557 |
651 |
891 |
3.92 |
95 |
37 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
191 |
192 |
48.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10086 |
Augustus |
mRNA |
5686 |
8688 |
. |
+ |
. |
ID=Dca485.1;Parent=Dca485 |
| scaffold10086 |
Augustus |
exon |
5686 |
6205 |
. |
+ |
. |
ID=Dca485.1.exon1;Parent=Dca485.1 |
| scaffold10086 |
Augustus |
exon |
6333 |
7765 |
. |
+ |
. |
ID=Dca485.1.exon2;Parent=Dca485.1 |
| scaffold10086 |
Augustus |
exon |
7848 |
8018 |
. |
+ |
. |
ID=Dca485.1.exon3;Parent=Dca485.1 |
| scaffold10086 |
Augustus |
exon |
8137 |
8688 |
. |
+ |
. |
ID=Dca485.1.exon4;Parent=Dca485.1 |
