Carnation DB

Dca48534.1

Annotation

9-exons
f-1
sp|B9I4D6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570500#GO:0005634;GO:0003712#1F0P1C
sp|B9R9G2_RICCO#Transcriptional corepressor SEUSS, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1496960#GO:0005634;GO:0003712#1F0P1C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48534.1	85	521	522	52.87	437	49	1e-142
Target_name	Start	End	Length	Cov(%)
sp\|B9I4D6_POPTR	300	872	873	65.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48534.1	96	427	522	38.69	332	55	1e-114
Target_name	Start	End	Length	Cov(%)
AT5G62090.1	291	661	816	45.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	158029	160520	.	+	.	ID=Dca48534.1;Parent=Dca48534
scaffold6	Augustus	exon	158029	158367	.	+	.	ID=Dca48534.1.exon1;Parent=Dca48534.1
scaffold6	Augustus	exon	158477	158608	.	+	.	ID=Dca48534.1.exon2;Parent=Dca48534.1
scaffold6	Augustus	exon	158744	158792	.	+	.	ID=Dca48534.1.exon3;Parent=Dca48534.1
scaffold6	Augustus	exon	158927	159141	.	+	.	ID=Dca48534.1.exon4;Parent=Dca48534.1
scaffold6	Augustus	exon	159250	159318	.	+	.	ID=Dca48534.1.exon5;Parent=Dca48534.1
scaffold6	Augustus	exon	159473	159573	.	+	.	ID=Dca48534.1.exon6;Parent=Dca48534.1
scaffold6	Augustus	exon	159678	159771	.	+	.	ID=Dca48534.1.exon7;Parent=Dca48534.1
scaffold6	Augustus	exon	159861	159930	.	+	.	ID=Dca48534.1.exon8;Parent=Dca48534.1
scaffold6	Augustus	exon	160021	160520	.	+	.	ID=Dca48534.1.exon9;Parent=Dca48534.1