Carnation DB

Dca48536.1

Annotation

5-exons
f-1
sp|F6HP61_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0100g00510#unknown#0F0P0C
AT4G00755.1 | Symbols: | F-box family protein | chr4:325294-326787 FORWARD LENGTH=377
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48536.1	6	300	312	49.35	295	50	2e-81
Target_name	Start	End	Length	Cov(%)
sp\|F6HP61_VITVI	6	313	365	84.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48536.1	6	312	312	43.26	307	42	1e-65
Target_name	Start	End	Length	Cov(%)
AT4G00755.1	2	326	377	86.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	163671	165184	.	-	.	ID=Dca48536.1;Parent=Dca48536
scaffold6	Augus-PASA	exon	163671	163812	.	-	.	ID=Dca48536.1.exon1;Parent=Dca48536.1
scaffold6	Augus-PASA	exon	164115	164233	.	-	.	ID=Dca48536.1.exon2;Parent=Dca48536.1
scaffold6	Augus-PASA	exon	164349	164494	.	-	.	ID=Dca48536.1.exon3;Parent=Dca48536.1
scaffold6	Augus-PASA	exon	164573	164977	.	-	.	ID=Dca48536.1.exon4;Parent=Dca48536.1
scaffold6	Augustus	exon	165058	165184	.	-	.	ID=Dca48536.1.exon5;Parent=Dca48536.1