Carnation DB

Dca48618.1

Annotation

7-exons
f-1
sp|A5AJ55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041592#unknown#0F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48618.1	13	210	513	20.46	198	50	2e-44
Target_name	Start	End	Length	Cov(%)
sp\|A5AJ55_VITVI	2	212	225	93.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48618.1	33	210	513	18.9	178	52	1e-42
Target_name	Start	End	Length	Cov(%)
AT1G20770.1	30	211	215	84.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	761145	768139	.	+	.	ID=Dca48618.1;Parent=Dca48618
scaffold6	Augus-PASA	exon	761145	761321	.	+	.	ID=Dca48618.1.exon1;Parent=Dca48618.1
scaffold6	Augus-PASA	exon	762549	762666	.	+	.	ID=Dca48618.1.exon2;Parent=Dca48618.1
scaffold6	Augus-PASA	exon	763536	763667	.	+	.	ID=Dca48618.1.exon3;Parent=Dca48618.1
scaffold6	Augus-PASA	exon	763791	763843	.	+	.	ID=Dca48618.1.exon4;Parent=Dca48618.1
scaffold6	Augus-PASA	exon	764204	764291	.	+	.	ID=Dca48618.1.exon5;Parent=Dca48618.1
scaffold6	Augustus	exon	764406	764467	.	+	.	ID=Dca48618.1.exon6;Parent=Dca48618.1
scaffold6	Augustus	exon	767228	768139	.	+	.	ID=Dca48618.1.exon7;Parent=Dca48618.1