Carnation DB

Dca48730.1

Annotation

11-exons
f-1
sp|B9IHV9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_255480#GO:0003677;GO:0004519;GO:0006281#2F1P0C
sp|B9SVS9_RICCO#Ap endonuclease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0255500#GO:0005622;GO:0003677;GO:0003906;GO:0004519;GO:0006281#3F1P1C
Repeat List (scaffold602)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48730.1	2	347	549	32.05	346	51	2e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9IHV9_POPTR	4	292	428	67.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48730.1	158	347	549	21.12	190	61	2e-66
Target_name	Start	End	Length	Cov(%)
Os01t0801000-01	187	363	500	35.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold602	Augustus	mRNA	43453	50278	.	+	.	ID=Dca48730.1;Parent=Dca48730
scaffold602	Augustus	exon	43453	43520	.	+	.	ID=Dca48730.1.exon1;Parent=Dca48730.1
scaffold602	Augustus	exon	44427	44506	.	+	.	ID=Dca48730.1.exon2;Parent=Dca48730.1
scaffold602	Augustus	exon	44620	44901	.	+	.	ID=Dca48730.1.exon3;Parent=Dca48730.1
scaffold602	Augustus	exon	45035	45399	.	+	.	ID=Dca48730.1.exon4;Parent=Dca48730.1
scaffold602	Augustus	exon	45795	45902	.	+	.	ID=Dca48730.1.exon5;Parent=Dca48730.1
scaffold602	Augustus	exon	46578	46715	.	+	.	ID=Dca48730.1.exon6;Parent=Dca48730.1
scaffold602	Augustus	exon	47650	47757	.	+	.	ID=Dca48730.1.exon7;Parent=Dca48730.1
scaffold602	Augustus	exon	48433	48570	.	+	.	ID=Dca48730.1.exon8;Parent=Dca48730.1
scaffold602	Augustus	exon	49389	49469	.	+	.	ID=Dca48730.1.exon9;Parent=Dca48730.1
scaffold602	Augustus	exon	49711	49870	.	+	.	ID=Dca48730.1.exon10;Parent=Dca48730.1
scaffold602	Augustus	exon	50157	50278	.	+	.	ID=Dca48730.1.exon11;Parent=Dca48730.1