Dca48858.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold6052)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48858.1 |
25 |
493 |
535 |
46.35 |
469 |
52 |
2e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
227 |
698 |
1717 |
27.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48858.1 |
297 |
389 |
535 |
5.79 |
93 |
34 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6052 |
Augustus |
mRNA |
3768 |
8057 |
. |
- |
. |
ID=Dca48858.1;Parent=Dca48858 |
| scaffold6052 |
Augustus |
exon |
3768 |
3893 |
. |
- |
. |
ID=Dca48858.1.exon1;Parent=Dca48858.1 |
| scaffold6052 |
Augustus |
exon |
6508 |
7265 |
. |
- |
. |
ID=Dca48858.1.exon2;Parent=Dca48858.1 |
| scaffold6052 |
Augustus |
exon |
7334 |
8057 |
. |
- |
. |
ID=Dca48858.1.exon3;Parent=Dca48858.1 |
