Dca48870.1
Annotation
- 3-exons
- f-1
- sp|B9N7U9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584200#unknown#0F0P0C
- sp|A2Q500_MEDTR#Endonuclease/exonuclease/phosphatase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MtrDRAFT_AC158465g18v2#GO:0005622;GO:0005488;GO:0004519;GO:0004527;GO:0006396#3F1P1C
- Repeat List (scaffold6059)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48870.1 |
232 |
472 |
495 |
15.75 |
241 |
32 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7U9_POPTR |
456 |
702 |
819 |
30.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48870.1 |
287 |
477 |
495 |
11.71 |
191 |
30 |
8e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
222 |
415 |
626 |
30.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6059 |
Augustus |
mRNA |
15077 |
16887 |
. |
+ |
. |
ID=Dca48870.1;Parent=Dca48870 |
| scaffold6059 |
Augustus |
exon |
15077 |
15283 |
. |
+ |
. |
ID=Dca48870.1.exon1;Parent=Dca48870.1 |
| scaffold6059 |
Augustus |
exon |
15360 |
15852 |
. |
+ |
. |
ID=Dca48870.1.exon2;Parent=Dca48870.1 |
| scaffold6059 |
Augustus |
exon |
16100 |
16887 |
. |
+ |
. |
ID=Dca48870.1.exon3;Parent=Dca48870.1 |
