Carnation DB

Dca48985.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q9FL83_ARATH#Non-LTR retroelement reverse transcriptase-like protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold6080)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48985.1	326	553	1409	5.96	228	37	4e-39
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	3	231	1114	20.55

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6080	Augustus	mRNA	11784	19111	.	+	.	ID=Dca48985.1;Parent=Dca48985
scaffold6080	Augustus	exon	11784	11927	.	+	.	ID=Dca48985.1.exon1;Parent=Dca48985.1
scaffold6080	Augustus	exon	12032	12823	.	+	.	ID=Dca48985.1.exon2;Parent=Dca48985.1
scaffold6080	Augustus	exon	12924	13643	.	+	.	ID=Dca48985.1.exon3;Parent=Dca48985.1
scaffold6080	Augustus	exon	13824	16183	.	+	.	ID=Dca48985.1.exon4;Parent=Dca48985.1
scaffold6080	Augustus	exon	18898	19111	.	+	.	ID=Dca48985.1.exon5;Parent=Dca48985.1