Dca49349.1
Annotation
- 2-exons
- f-1
- sp|Q10HX7_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g37554#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold616)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49349.1 |
12 |
148 |
151 |
31.78 |
137 |
32 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10HX7_ORYSJ |
89 |
237 |
1142 |
13.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold616 |
Augustus |
mRNA |
95846 |
96450 |
. |
- |
. |
ID=Dca49349.1;Parent=Dca49349 |
| scaffold616 |
Augustus |
exon |
95846 |
96085 |
. |
- |
. |
ID=Dca49349.1.exon1;Parent=Dca49349.1 |
| scaffold616 |
Augustus |
exon |
96235 |
96450 |
. |
- |
. |
ID=Dca49349.1.exon2;Parent=Dca49349.1 |
