Dca4944.1
Annotation
- 4-exons
- f-1
- sp|B9IB02_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_664956#GO:0003779;GO:0030036#1F1P0C
- AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | formin homology 1 | chr3:9251320-9254826 REVERSE LENGTH=1051
- Repeat List (scaffold1189)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4944.1 |
557 |
1032 |
1035 |
35.16 |
476 |
75 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IB02_POPTR |
49 |
528 |
532 |
90.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4944.1 |
512 |
1025 |
1035 |
35.16 |
514 |
71 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G25500.1 |
540 |
1026 |
1051 |
46.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1189 |
Augustus |
mRNA |
41363 |
45334 |
. |
+ |
. |
ID=Dca4944.1;Parent=Dca4944 |
| scaffold1189 |
Augustus |
exon |
41363 |
43209 |
. |
+ |
. |
ID=Dca4944.1.exon1;Parent=Dca4944.1 |
| scaffold1189 |
Augustus |
exon |
43309 |
43508 |
. |
+ |
. |
ID=Dca4944.1.exon2;Parent=Dca4944.1 |
| scaffold1189 |
Augus-PASA |
exon |
44187 |
44431 |
. |
+ |
. |
ID=Dca4944.1.exon3;Parent=Dca4944.1 |
| scaffold1189 |
Augus-PASA |
exon |
44519 |
45334 |
. |
+ |
. |
ID=Dca4944.1.exon4;Parent=Dca4944.1 |
