Carnation DB

Dca49456.1

Annotation

7-exons
f-1
sp|G5DX62_SILLA#2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0016706#1F0P0C
Repeat List (scaffold6187)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49456.1	100	348	404	54.7	249	85	1e-127
Target_name	Start	End	Length	Cov(%)
sp\|G5DX62_SILLA	2	261	261	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49456.1	108	376	404	44.3	269	61	5e-102
Target_name	Start	End	Length	Cov(%)
Os06t0138200-01	170	464	617	47.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6187	Augus-PASA	mRNA	6031	8230	.	+	.	ID=Dca49456.1;Parent=Dca49456
scaffold6187	Augus-PASA	exon	6031	6190	.	+	.	ID=Dca49456.1.exon1;Parent=Dca49456.1
scaffold6187	Augustus	exon	6595	6762	.	+	.	ID=Dca49456.1.exon2;Parent=Dca49456.1
scaffold6187	Augustus	exon	6856	7053	.	+	.	ID=Dca49456.1.exon3;Parent=Dca49456.1
scaffold6187	Augustus	exon	7144	7190	.	+	.	ID=Dca49456.1.exon4;Parent=Dca49456.1
scaffold6187	Augus-PASA	exon	7317	7627	.	+	.	ID=Dca49456.1.exon5;Parent=Dca49456.1
scaffold6187	Augus-PASA	exon	7791	7862	.	+	.	ID=Dca49456.1.exon6;Parent=Dca49456.1
scaffold6187	Augus-PASA	exon	7972	8230	.	+	.	ID=Dca49456.1.exon7;Parent=Dca49456.1