Carnation DB

Dca49458.1

Annotation

5-exons
f-1
sp|Q9T090_ARATH#26S proteasome regulatory particle chain RPT6-like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g27680#GO:0000502;GO:0005524;GO:0017111#2F0P1C
Repeat List (scaffold6187)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49458.1	2	390	390	78.46	389	79	1e-179
Target_name	Start	End	Length	Cov(%)
sp\|Q9T090_ARATH	3	388	398	96.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49458.1	2	390	390	78.46	389	79	0
Target_name	Start	End	Length	Cov(%)
AT4G27680.1	3	388	398	96.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6187	Augus-PASA	mRNA	12016	15117	.	-	.	ID=Dca49458.1;Parent=Dca49458
scaffold6187	Augus-PASA	exon	12016	12237	.	-	.	ID=Dca49458.1.exon1;Parent=Dca49458.1
scaffold6187	Augus-PASA	exon	12386	12681	.	-	.	ID=Dca49458.1.exon2;Parent=Dca49458.1
scaffold6187	Augus-PASA	exon	12778	12936	.	-	.	ID=Dca49458.1.exon3;Parent=Dca49458.1
scaffold6187	Augustus	exon	13072	13372	.	-	.	ID=Dca49458.1.exon4;Parent=Dca49458.1
scaffold6187	Augustus	exon	14923	15117	.	-	.	ID=Dca49458.1.exon5;Parent=Dca49458.1