Carnation DB

Dca49524.1

Annotation

11-exons
f-1
sp|B9HS26_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557406#unknown#0F0P0C
Os03t0109700-02 Similar to Cyclin delta-3.
Repeat List (scaffold62)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49524.1	1	339	339	71.68	339	72	3e-146
Target_name	Start	End	Length	Cov(%)
sp\|B9HS26_POPTR	1	339	339	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49524.1	35	339	339	62.53	305	69	4e-125
Target_name	Start	End	Length	Cov(%)
AT4G34090.3	84	390	390	78.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold62	Augus-PASA	mRNA	166715	169644	.	+	.	ID=Dca49524.1;Parent=Dca49524
scaffold62	Augus-PASA	exon	166715	166814	.	+	.	ID=Dca49524.1.exon1;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	167383	167466	.	+	.	ID=Dca49524.1.exon2;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	167550	167624	.	+	.	ID=Dca49524.1.exon3;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	167733	167775	.	+	.	ID=Dca49524.1.exon4;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	167866	167923	.	+	.	ID=Dca49524.1.exon5;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	168348	168515	.	+	.	ID=Dca49524.1.exon6;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	168589	168651	.	+	.	ID=Dca49524.1.exon7;Parent=Dca49524.1
scaffold62	Augus-PASA	exon	168745	168839	.	+	.	ID=Dca49524.1.exon8;Parent=Dca49524.1
scaffold62	Augustus	exon	168932	169013	.	+	.	ID=Dca49524.1.exon9;Parent=Dca49524.1
scaffold62	Augustus	exon	169305	169415	.	+	.	ID=Dca49524.1.exon10;Parent=Dca49524.1
scaffold62	Augustus	exon	169504	169644	.	+	.	ID=Dca49524.1.exon11;Parent=Dca49524.1