Dca49570.1
Annotation
- 3-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold620)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49570.1 |
15 |
94 |
205 |
22.92 |
80 |
36 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
82 |
212 |
1307 |
10.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold620 |
Augustus |
mRNA |
121801 |
123610 |
. |
- |
. |
ID=Dca49570.1;Parent=Dca49570 |
| scaffold620 |
Augustus |
exon |
121801 |
122148 |
. |
- |
. |
ID=Dca49570.1.exon1;Parent=Dca49570.1 |
| scaffold620 |
Augustus |
exon |
123213 |
123371 |
. |
- |
. |
ID=Dca49570.1.exon2;Parent=Dca49570.1 |
| scaffold620 |
Augustus |
exon |
123500 |
123610 |
. |
- |
. |
ID=Dca49570.1.exon3;Parent=Dca49570.1 |
