Carnation DB

Dca4972.1

Annotation

7-exons
f-1
sp|B9SFP5_RICCO#Exonuclease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0648420#GO:0005622;GO:0004527;GO:0003676;GO:0008270#3F0P1C
Repeat List (scaffold119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4972.1	1	362	366	63.66	362	63	2e-132
Target_name	Start	End	Length	Cov(%)
sp\|B9SFP5_RICCO	1	359	365	98.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4972.1	1	363	366	52.73	363	53	3e-105
Target_name	Start	End	Length	Cov(%)
AT2G48100.1	1	341	344	99.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold119	Augus-PASA	mRNA	86519	90054	.	+	.	ID=Dca4972.1;Parent=Dca4972
scaffold119	Augus-PASA	exon	86519	86562	.	+	.	ID=Dca4972.1.exon1;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	88048	88199	.	+	.	ID=Dca4972.1.exon2;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	88297	88430	.	+	.	ID=Dca4972.1.exon3;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	88510	88733	.	+	.	ID=Dca4972.1.exon4;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	88851	89057	.	+	.	ID=Dca4972.1.exon5;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	89490	89570	.	+	.	ID=Dca4972.1.exon6;Parent=Dca4972.1
scaffold119	Augus-PASA	exon	89796	90054	.	+	.	ID=Dca4972.1.exon7;Parent=Dca4972.1