Carnation DB

Dca49806.1

Annotation

5-exons
f-1
sp|B9I7A6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_729481#GO:0003824#1F0P0C
AT5G27930.1 | Symbols: | Protein phosphatase 2C family protein | chr5:9958199-9960219 REVERSE LENGTH=373
Repeat List (scaffold626)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49806.1	1	372	372	74.46	372	75	7e-167
Target_name	Start	End	Length	Cov(%)
sp\|B9I7A6_POPTR	1	368	368	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49806.1	1	352	372	65.59	352	70	4e-152
Target_name	Start	End	Length	Cov(%)
AT5G27930.1	1	353	373	94.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold626	Augus-PASA	mRNA	104848	107577	.	-	.	ID=Dca49806.1;Parent=Dca49806
scaffold626	Augus-PASA	exon	104848	105069	.	-	.	ID=Dca49806.1.exon1;Parent=Dca49806.1
scaffold626	Augus-PASA	exon	105236	105459	.	-	.	ID=Dca49806.1.exon2;Parent=Dca49806.1
scaffold626	Augus-PASA	exon	105568	105685	.	-	.	ID=Dca49806.1.exon3;Parent=Dca49806.1
scaffold626	Augus-PASA	exon	106728	107036	.	-	.	ID=Dca49806.1.exon4;Parent=Dca49806.1
scaffold626	Augus-PASA	exon	107332	107577	.	-	.	ID=Dca49806.1.exon5;Parent=Dca49806.1