Dca49888.1
Annotation
- 4-exons
- f-1
- sp|A5AVN9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_039744#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold6288)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49888.1 |
63 |
429 |
732 |
24.31 |
367 |
49 |
2e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AVN9_VITVI |
366 |
666 |
1136 |
26.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49888.1 |
161 |
298 |
732 |
8.06 |
138 |
43 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
624 |
762 |
1401 |
9.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6288 |
Augustus |
mRNA |
3915 |
7178 |
. |
+ |
. |
ID=Dca49888.1;Parent=Dca49888 |
| scaffold6288 |
Augustus |
exon |
3915 |
4092 |
. |
+ |
. |
ID=Dca49888.1.exon1;Parent=Dca49888.1 |
| scaffold6288 |
Augustus |
exon |
4197 |
4493 |
. |
+ |
. |
ID=Dca49888.1.exon2;Parent=Dca49888.1 |
| scaffold6288 |
Augustus |
exon |
4965 |
5777 |
. |
+ |
. |
ID=Dca49888.1.exon3;Parent=Dca49888.1 |
| scaffold6288 |
Augustus |
exon |
6268 |
7178 |
. |
+ |
. |
ID=Dca49888.1.exon4;Parent=Dca49888.1 |
