Carnation DB

Dca4990.1

Annotation

7-exons
f-1
sp|D7SPX8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00170#GO:0003676;GO:0008270#2F0P0C
sp|B9RAN9_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507490#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4990.1	340	510	549	9.28	171	30	2e-12
Target_name	Start	End	Length	Cov(%)
sp\|D7SPX8_VITVI	55	178	417	29.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4990.1	341	543	549	11.11	203	30	4e-20
Target_name	Start	End	Length	Cov(%)
AT3G48440.1	107	267	448	35.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold119	Augustus	mRNA	274680	278286	.	+	.	ID=Dca4990.1;Parent=Dca4990
scaffold119	Augustus	exon	274680	275096	.	+	.	ID=Dca4990.1.exon1;Parent=Dca4990.1
scaffold119	Augustus	exon	275213	275269	.	+	.	ID=Dca4990.1.exon2;Parent=Dca4990.1
scaffold119	Augustus	exon	276707	276823	.	+	.	ID=Dca4990.1.exon3;Parent=Dca4990.1
scaffold119	Augustus	exon	276919	277233	.	+	.	ID=Dca4990.1.exon4;Parent=Dca4990.1
scaffold119	Augustus	exon	277359	277628	.	+	.	ID=Dca4990.1.exon5;Parent=Dca4990.1
scaffold119	Augustus	exon	277730	277996	.	+	.	ID=Dca4990.1.exon6;Parent=Dca4990.1
scaffold119	Augustus	exon	278080	278286	.	+	.	ID=Dca4990.1.exon7;Parent=Dca4990.1