Carnation DB

Dca5011.1

Annotation

8-exons
f-1
sp|A5BNX7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_037096#GO:0016021#0F0P1C
Os12t0175700-01 Nonaspanin (TM9SF) family protein.
Repeat List (scaffold1191)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5011.1	150	276	339	28.31	127	73	3e-39
Target_name	Start	End	Length	Cov(%)
sp\|A5BNX7_VITVI	458	590	600	22.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5011.1	150	276	339	32.15	127	86	2e-53
Target_name	Start	End	Length	Cov(%)
Os12t0175700-01	462	588	599	21.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1191	Augustus	mRNA	13377	16292	.	+	.	ID=Dca5011.1;Parent=Dca5011
scaffold1191	Augustus	exon	13377	13514	.	+	.	ID=Dca5011.1.exon1;Parent=Dca5011.1
scaffold1191	Augustus	exon	13588	13727	.	+	.	ID=Dca5011.1.exon2;Parent=Dca5011.1
scaffold1191	Augustus	exon	13875	13973	.	+	.	ID=Dca5011.1.exon3;Parent=Dca5011.1
scaffold1191	Augustus	exon	14108	14192	.	+	.	ID=Dca5011.1.exon4;Parent=Dca5011.1
scaffold1191	Augustus	exon	14311	14367	.	+	.	ID=Dca5011.1.exon5;Parent=Dca5011.1
scaffold1191	Augustus	exon	14517	14790	.	+	.	ID=Dca5011.1.exon6;Parent=Dca5011.1
scaffold1191	Augustus	exon	14878	14909	.	+	.	ID=Dca5011.1.exon7;Parent=Dca5011.1
scaffold1191	Augustus	exon	16098	16292	.	+	.	ID=Dca5011.1.exon8;Parent=Dca5011.1