Carnation DB

Dca50140.1

Annotation

16-exons
f-1
sp|B9HYQ6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_888231#GO:0005524;GO:0004674;GO:0005529;GO:0048544#3F1P0C
AT1G11330.2 | Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842
Repeat List (scaffold634)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50140.1	1	243	1244	12.13	243	63	4e-87
Target_name	Start	End	Length	Cov(%)
sp\|B9HYQ6_POPTR	558	794	827	28.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50140.1	1	243	1244	12.86	243	66	3e-91
Target_name	Start	End	Length	Cov(%)
AT1G11330.2	566	809	842	28.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold634	Augustus	mRNA	106132	114529	.	-	.	ID=Dca50140.1;Parent=Dca50140
scaffold634	Augustus	exon	106132	106434	.	-	.	ID=Dca50140.1.exon1;Parent=Dca50140.1
scaffold634	Augustus	exon	106509	106653	.	-	.	ID=Dca50140.1.exon2;Parent=Dca50140.1
scaffold634	Augustus	exon	106753	106990	.	-	.	ID=Dca50140.1.exon3;Parent=Dca50140.1
scaffold634	Augustus	exon	107114	107324	.	-	.	ID=Dca50140.1.exon4;Parent=Dca50140.1
scaffold634	Augustus	exon	107402	107562	.	-	.	ID=Dca50140.1.exon5;Parent=Dca50140.1
scaffold634	Augustus	exon	107629	107733	.	-	.	ID=Dca50140.1.exon6;Parent=Dca50140.1
scaffold634	Augustus	exon	107908	108901	.	-	.	ID=Dca50140.1.exon7;Parent=Dca50140.1
scaffold634	Augustus	exon	110082	110214	.	-	.	ID=Dca50140.1.exon8;Parent=Dca50140.1
scaffold634	Augustus	exon	110304	110541	.	-	.	ID=Dca50140.1.exon9;Parent=Dca50140.1
scaffold634	Augustus	exon	110626	110836	.	-	.	ID=Dca50140.1.exon10;Parent=Dca50140.1
scaffold634	Augustus	exon	110916	111073	.	-	.	ID=Dca50140.1.exon11;Parent=Dca50140.1
scaffold634	Augustus	exon	111184	111294	.	-	.	ID=Dca50140.1.exon12;Parent=Dca50140.1
scaffold634	Augustus	exon	113250	113457	.	-	.	ID=Dca50140.1.exon13;Parent=Dca50140.1
scaffold634	Augustus	exon	113532	113676	.	-	.	ID=Dca50140.1.exon14;Parent=Dca50140.1
scaffold634	Augustus	exon	113776	114013	.	-	.	ID=Dca50140.1.exon15;Parent=Dca50140.1
scaffold634	Augustus	exon	114394	114529	.	-	.	ID=Dca50140.1.exon16;Parent=Dca50140.1