Carnation DB

Dca50200.1

Annotation

7-exons
f-1
sp|B9GKN4_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1067015#unknown#0F0P0C
Repeat List (scaffold635)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50200.1	1	106	285	20.7	106	56	2e-28
Target_name	Start	End	Length	Cov(%)
sp\|B9GKN4_POPTR	59	159	299	33.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50200.1	1	107	285	21.75	107	58	9e-29
Target_name	Start	End	Length	Cov(%)
AT1G12710.1	51	151	291	34.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold635	Augustus	mRNA	172818	178434	.	-	.	ID=Dca50200.1;Parent=Dca50200
scaffold635	Augustus	exon	172818	172846	.	-	.	ID=Dca50200.1.exon1;Parent=Dca50200.1
scaffold635	Augustus	exon	173108	173323	.	-	.	ID=Dca50200.1.exon2;Parent=Dca50200.1
scaffold635	Augustus	exon	173441	173561	.	-	.	ID=Dca50200.1.exon3;Parent=Dca50200.1
scaffold635	Augustus	exon	174544	174658	.	-	.	ID=Dca50200.1.exon4;Parent=Dca50200.1
scaffold635	Augustus	exon	177782	177838	.	-	.	ID=Dca50200.1.exon5;Parent=Dca50200.1
scaffold635	Augustus	exon	178025	178143	.	-	.	ID=Dca50200.1.exon6;Parent=Dca50200.1
scaffold635	Augustus	exon	178234	178434	.	-	.	ID=Dca50200.1.exon7;Parent=Dca50200.1