Dca50294.1
Annotation
- 3-exons
- f-1
- sp|B9GG85_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_641460#GO:0008270#1F0P0C
- Os01t0954400-01 Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor.
- Repeat List (scaffold638)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50294.1 |
28 |
247 |
249 |
53.41 |
220 |
60 |
5e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GG85_POPTR |
36 |
238 |
240 |
84.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50294.1 |
26 |
247 |
249 |
51.4 |
222 |
56 |
6e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0954400-01 |
46 |
259 |
281 |
76.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold638 |
Augus-PASA |
mRNA |
51900 |
53751 |
. |
- |
. |
ID=Dca50294.1;Parent=Dca50294 |
| scaffold638 |
Augus-PASA |
exon |
51900 |
52380 |
. |
- |
. |
ID=Dca50294.1.exon1;Parent=Dca50294.1 |
| scaffold638 |
Augus-PASA |
exon |
52748 |
52852 |
. |
- |
. |
ID=Dca50294.1.exon2;Parent=Dca50294.1 |
| scaffold638 |
Augustus |
exon |
53588 |
53751 |
. |
- |
. |
ID=Dca50294.1.exon3;Parent=Dca50294.1 |
