Dca50336.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold6391)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50336.1 |
94 |
365 |
806 |
12.65 |
272 |
35 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
26 |
310 |
1717 |
16.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50336.1 |
486 |
578 |
806 |
3.97 |
93 |
35 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6391 |
Augustus |
mRNA |
15922 |
19541 |
. |
+ |
. |
ID=Dca50336.1;Parent=Dca50336 |
| scaffold6391 |
Augustus |
exon |
15922 |
16147 |
. |
+ |
. |
ID=Dca50336.1.exon1;Parent=Dca50336.1 |
| scaffold6391 |
Augustus |
exon |
16992 |
17877 |
. |
+ |
. |
ID=Dca50336.1.exon2;Parent=Dca50336.1 |
| scaffold6391 |
Augustus |
exon |
18149 |
18283 |
. |
+ |
. |
ID=Dca50336.1.exon3;Parent=Dca50336.1 |
| scaffold6391 |
Augustus |
exon |
18368 |
19541 |
. |
+ |
. |
ID=Dca50336.1.exon4;Parent=Dca50336.1 |
