Dca50455.1
Annotation
- 2-exons
- f-1
- sp|Q2QSG2_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24220#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6408)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50455.1 |
6 |
432 |
433 |
51.27 |
427 |
40 |
2e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QSG2_ORYSJ |
637 |
1183 |
1597 |
34.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6408 |
Augustus |
mRNA |
6461 |
7907 |
. |
- |
. |
ID=Dca50455.1;Parent=Dca50455 |
| scaffold6408 |
Augustus |
exon |
6461 |
7557 |
. |
- |
. |
ID=Dca50455.1.exon1;Parent=Dca50455.1 |
| scaffold6408 |
Augustus |
exon |
7703 |
7907 |
. |
- |
. |
ID=Dca50455.1.exon2;Parent=Dca50455.1 |
