Dca50503.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold642)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50503.1 |
1 |
192 |
218 |
50 |
192 |
57 |
2e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1300 |
1493 |
1501 |
12.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50503.1 |
1 |
189 |
218 |
33.48 |
189 |
39 |
7e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
37 |
225 |
230 |
82.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold642 |
Augustus |
mRNA |
33413 |
35211 |
. |
+ |
. |
ID=Dca50503.1;Parent=Dca50503 |
| scaffold642 |
Augustus |
exon |
33413 |
33989 |
. |
+ |
. |
ID=Dca50503.1.exon1;Parent=Dca50503.1 |
| scaffold642 |
Augustus |
exon |
35132 |
35211 |
. |
+ |
. |
ID=Dca50503.1.exon2;Parent=Dca50503.1 |
