Carnation DB

Dca5053.1

Annotation

18-exons
f-1
sp|D7SUM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g04720#unknown#0F0P0C
AT5G11350.1 | Symbols: | DNAse I-like superfamily protein | chr5:3621583-3625412 FORWARD LENGTH=754
Repeat List (scaffold1193)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5053.1	445	554	838	10.02	110	77	1e-43
Target_name	Start	End	Length	Cov(%)
sp\|D7SUM2_VITVI	675	784	786	13.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5053.1	423	557	838	9.78	135	59	3e-39
Target_name	Start	End	Length	Cov(%)
AT5G11350.1	609	749	754	18.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1193	Augustus	mRNA	4427	15331	.	-	.	ID=Dca5053.1;Parent=Dca5053
scaffold1193	Augustus	exon	4427	5138	.	-	.	ID=Dca5053.1.exon1;Parent=Dca5053.1
scaffold1193	Augustus	exon	7834	7974	.	-	.	ID=Dca5053.1.exon2;Parent=Dca5053.1
scaffold1193	Augustus	exon	8905	8954	.	-	.	ID=Dca5053.1.exon3;Parent=Dca5053.1
scaffold1193	Augus-PASA	exon	9377	9461	.	-	.	ID=Dca5053.1.exon4;Parent=Dca5053.1
scaffold1193	Augus-PASA	exon	9556	9641	.	-	.	ID=Dca5053.1.exon5;Parent=Dca5053.1
scaffold1193	Augustus	exon	10154	10311	.	-	.	ID=Dca5053.1.exon6;Parent=Dca5053.1
scaffold1193	Augustus	exon	10402	10583	.	-	.	ID=Dca5053.1.exon7;Parent=Dca5053.1
scaffold1193	Augustus	exon	10658	10749	.	-	.	ID=Dca5053.1.exon8;Parent=Dca5053.1
scaffold1193	Augustus	exon	10833	10865	.	-	.	ID=Dca5053.1.exon9;Parent=Dca5053.1
scaffold1193	Augustus	exon	10962	11054	.	-	.	ID=Dca5053.1.exon10;Parent=Dca5053.1
scaffold1193	Augustus	exon	11420	11501	.	-	.	ID=Dca5053.1.exon11;Parent=Dca5053.1
scaffold1193	Augustus	exon	12062	12102	.	-	.	ID=Dca5053.1.exon12;Parent=Dca5053.1
scaffold1193	Augustus	exon	12419	12500	.	-	.	ID=Dca5053.1.exon13;Parent=Dca5053.1
scaffold1193	Augustus	exon	12663	12715	.	-	.	ID=Dca5053.1.exon14;Parent=Dca5053.1
scaffold1193	Augustus	exon	13404	13469	.	-	.	ID=Dca5053.1.exon15;Parent=Dca5053.1
scaffold1193	Augustus	exon	13707	13870	.	-	.	ID=Dca5053.1.exon16;Parent=Dca5053.1
scaffold1193	Augustus	exon	14847	15144	.	-	.	ID=Dca5053.1.exon17;Parent=Dca5053.1
scaffold1193	Augustus	exon	15233	15331	.	-	.	ID=Dca5053.1.exon18;Parent=Dca5053.1