Carnation DB

Dca50549.1

Annotation

5-exons
f-1
sp|D7SKJ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04340#GO:0003676;GO:0000166#2F0P0C
AT5G02530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:564332-565776 REVERSE LENGTH=292
Repeat List (scaffold643)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50549.1	1	252	261	57.85	252	59	4e-62
Target_name	Start	End	Length	Cov(%)
sp\|D7SKJ4_VITVI	1	241	243	99.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50549.1	1	190	261	44.06	190	57	7e-50
Target_name	Start	End	Length	Cov(%)
AT5G02530.1	1	201	292	68.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold643	Augustus	mRNA	103160	105749	.	-	.	ID=Dca50549.1;Parent=Dca50549
scaffold643	Augustus	exon	103160	103349	.	-	.	ID=Dca50549.1.exon1;Parent=Dca50549.1
scaffold643	Augustus	exon	103985	104172	.	-	.	ID=Dca50549.1.exon2;Parent=Dca50549.1
scaffold643	Augustus	exon	104257	104325	.	-	.	ID=Dca50549.1.exon3;Parent=Dca50549.1
scaffold643	Augustus	exon	105324	105485	.	-	.	ID=Dca50549.1.exon4;Parent=Dca50549.1
scaffold643	Augustus	exon	105573	105749	.	-	.	ID=Dca50549.1.exon5;Parent=Dca50549.1