Carnation DB

Dca50573.1

Annotation

5-exons
f-1
sp|D7TAK1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g02220#GO:0008270#1F0P0C
sp|B9RMQ0_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1082540#GO:0008270#1F0P0C
Repeat List (scaffold644)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50573.1	128	287	302	36.42	160	68	9e-60
Target_name	Start	End	Length	Cov(%)
sp\|D7TAK1_VITVI	22	184	247	65.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50573.1	124	287	302	30.13	164	55	2e-48
Target_name	Start	End	Length	Cov(%)
Os07t0275300-01	23	189	254	65.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold644	Augustus	mRNA	28171	33390	.	+	.	ID=Dca50573.1;Parent=Dca50573
scaffold644	Augustus	exon	28171	28491	.	+	.	ID=Dca50573.1.exon1;Parent=Dca50573.1
scaffold644	Augustus	exon	31879	32100	.	+	.	ID=Dca50573.1.exon2;Parent=Dca50573.1
scaffold644	Augustus	exon	32205	32271	.	+	.	ID=Dca50573.1.exon3;Parent=Dca50573.1
scaffold644	Augustus	exon	32350	32584	.	+	.	ID=Dca50573.1.exon4;Parent=Dca50573.1
scaffold644	Augustus	exon	33327	33390	.	+	.	ID=Dca50573.1.exon5;Parent=Dca50573.1