Carnation DB

Dca5061.1

Annotation

8-exons
f-1
sp|B8AXE7_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_19658#GO:0003676;GO:0000166#2F0P0C
Os05t0364600-01 Similar to pre-mRNA-splicing factor SF2.
Repeat List (scaffold11931)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5061.1	1	182	182	79.12	182	80	5e-75
Target_name	Start	End	Length	Cov(%)
sp\|B8AXE7_ORYSI	24	203	328	54.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5061.1	1	182	182	78.57	182	79	1e-75
Target_name	Start	End	Length	Cov(%)
Os05t0364600-01	26	205	320	56.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11931	Augustus	mRNA	1270	3780	.	-	.	ID=Dca5061.1;Parent=Dca5061
scaffold11931	Augustus	exon	1270	1326	.	-	.	ID=Dca5061.1.exon1;Parent=Dca5061.1
scaffold11931	Augustus	exon	1429	1478	.	-	.	ID=Dca5061.1.exon2;Parent=Dca5061.1
scaffold11931	Augustus	exon	1731	1794	.	-	.	ID=Dca5061.1.exon3;Parent=Dca5061.1
scaffold11931	Augustus	exon	1973	2019	.	-	.	ID=Dca5061.1.exon4;Parent=Dca5061.1
scaffold11931	Augustus	exon	3008	3107	.	-	.	ID=Dca5061.1.exon5;Parent=Dca5061.1
scaffold11931	Augustus	exon	3194	3268	.	-	.	ID=Dca5061.1.exon6;Parent=Dca5061.1
scaffold11931	Augustus	exon	3398	3463	.	-	.	ID=Dca5061.1.exon7;Parent=Dca5061.1
scaffold11931	Augustus	exon	3694	3780	.	-	.	ID=Dca5061.1.exon8;Parent=Dca5061.1