Carnation DB

Dca50633.1

Annotation

5-exons
f-2
sp|F6GXI3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00550#GO:0003697#1F0P0C
sp|Q58J68_SOLTU#Mitochondrial SBP40#Solanum tuberosum (Potato)#unknown#GO:0003697#1F0P0C
Repeat List (scaffold6456)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50633.1	1	114	233	17.59	114	36	3e-11
Target_name	Start	End	Length	Cov(%)
sp\|F6GXI3_VITVI	149	259	377	29.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50633.1	91	205	233	20.6	115	42	3e-20
Target_name	Start	End	Length	Cov(%)
AT4G20010.1	85	198	371	30.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6456	Augus-PASA	mRNA	13575	16076	.	-	.	ID=Dca50633.1;Parent=Dca50633
scaffold6456	Augus-PASA	exon	13575	13609	.	-	.	ID=Dca50633.1.exon1;Parent=Dca50633.1
scaffold6456	Augus-PASA	exon	13747	13837	.	-	.	ID=Dca50633.1.exon2;Parent=Dca50633.1
scaffold6456	Augus-PASA	exon	14069	14207	.	-	.	ID=Dca50633.1.exon3;Parent=Dca50633.1
scaffold6456	Augus-PASA	exon	15409	15704	.	-	.	ID=Dca50633.1.exon4;Parent=Dca50633.1
scaffold6456	Augustus	exon	15935	16076	.	-	.	ID=Dca50633.1.exon5;Parent=Dca50633.1