Carnation DB

Dca5078.1

Annotation

5-exons
f-1
sp|C0PCA8_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#unknown#0F0P0C
AT4G00380.1 | Symbols: | XH/XS domain-containing protein | chr4:167959-170448 FORWARD LENGTH=635
Repeat List (scaffold1194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5078.1	17	309	309	42.71	293	43	1e-51
Target_name	Start	End	Length	Cov(%)
sp\|C0PCA8_MAIZE	228	530	530	57.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5078.1	46	309	309	37.21	264	42	7e-49
Target_name	Start	End	Length	Cov(%)
AT4G00380.1	362	634	635	42.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1194	Augustus	mRNA	50310	52204	.	-	.	ID=Dca5078.1;Parent=Dca5078
scaffold1194	Augustus	exon	50310	50543	.	-	.	ID=Dca5078.1.exon1;Parent=Dca5078.1
scaffold1194	Augus-PASA	exon	50851	51063	.	-	.	ID=Dca5078.1.exon2;Parent=Dca5078.1
scaffold1194	Augus-PASA	exon	51425	51559	.	-	.	ID=Dca5078.1.exon3;Parent=Dca5078.1
scaffold1194	Augus-PASA	exon	51660	51796	.	-	.	ID=Dca5078.1.exon4;Parent=Dca5078.1
scaffold1194	Augustus	exon	51994	52204	.	-	.	ID=Dca5078.1.exon5;Parent=Dca5078.1