Carnation DB

Dca50816.1

Annotation

6-exons
f-1
sp|Q2HRW5_MEDTR#Syntaxin, N-terminal#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g084590, MtrDRAFT_AC157890g7v2#GO:0016020;GO:0016192#0F1P1C
Repeat List (scaffold65)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50816.1	1	240	246	66.66	240	68	4e-85
Target_name	Start	End	Length	Cov(%)
sp\|Q2HRW5_MEDTR	1	241	266	90.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50816.1	1	246	246	57.31	246	57	9e-70
Target_name	Start	End	Length	Cov(%)
AT5G46860.1	1	249	268	92.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold65	Augustus	mRNA	201114	205269	.	-	.	ID=Dca50816.1;Parent=Dca50816
scaffold65	Augustus	exon	201114	201223	.	-	.	ID=Dca50816.1.exon1;Parent=Dca50816.1
scaffold65	Augus-PASA	exon	201344	201501	.	-	.	ID=Dca50816.1.exon2;Parent=Dca50816.1
scaffold65	Augus-PASA	exon	202909	202971	.	-	.	ID=Dca50816.1.exon3;Parent=Dca50816.1
scaffold65	Augus-PASA	exon	203082	203221	.	-	.	ID=Dca50816.1.exon4;Parent=Dca50816.1
scaffold65	Augus-PASA	exon	204891	204984	.	-	.	ID=Dca50816.1.exon5;Parent=Dca50816.1
scaffold65	Augus-PASA	exon	205094	205269	.	-	.	ID=Dca50816.1.exon6;Parent=Dca50816.1