Dca50999.1
Annotation
- 4-exons
- f-1
- sp|B9GGH3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_841048#GO:0043565;GO:0003700#2F0P0C
- Os04t0597300-01 Similar to WERKY protein (Fragment).
- Repeat List (scaffold655)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50999.1 |
1 |
454 |
477 |
42.76 |
454 |
44 |
3e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GGH3_POPTR |
1 |
409 |
423 |
96.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50999.1 |
199 |
445 |
477 |
29.35 |
247 |
51 |
1e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0597300-01 |
112 |
373 |
415 |
63.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold655 |
Augustus |
mRNA |
97986 |
103126 |
. |
+ |
. |
ID=Dca50999.1;Parent=Dca50999 |
| scaffold655 |
Augustus |
exon |
97986 |
98641 |
. |
+ |
. |
ID=Dca50999.1.exon1;Parent=Dca50999.1 |
| scaffold655 |
Augustus |
exon |
102070 |
102210 |
. |
+ |
. |
ID=Dca50999.1.exon2;Parent=Dca50999.1 |
| scaffold655 |
Augustus |
exon |
102335 |
102507 |
. |
+ |
. |
ID=Dca50999.1.exon3;Parent=Dca50999.1 |
| scaffold655 |
Augustus |
exon |
102663 |
103126 |
. |
+ |
. |
ID=Dca50999.1.exon4;Parent=Dca50999.1 |
