Carnation DB

Dca511.1

Annotation

5-exons
f-1
sp|B9RB22_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1510560#GO:0003950#1F0P0C
AT5G62520.1 | Symbols: SRO5 | similar to RCD one 5 | chr5:25098071-25099264 FORWARD LENGTH=309
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca511.1	63	336	350	39.14	274	49	4e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9RB22_RICCO	68	337	374	72.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca511.1	67	339	350	34.28	273	44	5e-56
Target_name	Start	End	Length	Cov(%)
AT5G62520.1	43	309	309	86.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	25558	27655	.	+	.	ID=Dca511.1;Parent=Dca511
scaffold101	Augustus	exon	25558	26084	.	+	.	ID=Dca511.1.exon1;Parent=Dca511.1
scaffold101	Augustus	exon	26176	26426	.	+	.	ID=Dca511.1.exon2;Parent=Dca511.1
scaffold101	Augustus	exon	26510	26643	.	+	.	ID=Dca511.1.exon3;Parent=Dca511.1
scaffold101	Augustus	exon	26746	26844	.	+	.	ID=Dca511.1.exon4;Parent=Dca511.1
scaffold101	Augustus	exon	27614	27655	.	+	.	ID=Dca511.1.exon5;Parent=Dca511.1