Dca5119.1
Annotation
- 3-exons
- f-1
- sp|Q7Y1M7_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.9#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold11965)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5119.1 |
78 |
544 |
569 |
51.14 |
467 |
56 |
2e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7Y1M7_ORYSJ |
338 |
865 |
1161 |
45.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5119.1 |
90 |
233 |
569 |
10.89 |
144 |
43 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
529 |
673 |
1428 |
10.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11965 |
Augustus |
mRNA |
681 |
3377 |
. |
- |
. |
ID=Dca5119.1;Parent=Dca5119 |
| scaffold11965 |
Augustus |
exon |
681 |
1684 |
. |
- |
. |
ID=Dca5119.1.exon1;Parent=Dca5119.1 |
| scaffold11965 |
Augustus |
exon |
1802 |
2276 |
. |
- |
. |
ID=Dca5119.1.exon2;Parent=Dca5119.1 |
| scaffold11965 |
Augustus |
exon |
3147 |
3377 |
. |
- |
. |
ID=Dca5119.1.exon3;Parent=Dca5119.1 |
