Carnation DB

Dca5193.1

Annotation

5-exons
f-1
sp|B9R985_RICCO#Protein HVA22, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1514800#unknown#0F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5193.1	3	167	177	69.49	165	75	4e-68
Target_name	Start	End	Length	Cov(%)
sp\|B9R985_RICCO	2	160	171	92.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5193.1	3	175	177	62.14	173	64	2e-61
Target_name	Start	End	Length	Cov(%)
AT1G74520.1	2	171	177	96.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	147395	150148	.	-	.	ID=Dca5193.1;Parent=Dca5193
scaffold12	Augustus	exon	147395	147460	.	-	.	ID=Dca5193.1.exon1;Parent=Dca5193.1
scaffold12	Augustus	exon	147604	147856	.	-	.	ID=Dca5193.1.exon2;Parent=Dca5193.1
scaffold12	Augustus	exon	148167	148289	.	-	.	ID=Dca5193.1.exon3;Parent=Dca5193.1
scaffold12	Augustus	exon	149469	149495	.	-	.	ID=Dca5193.1.exon4;Parent=Dca5193.1
scaffold12	Augustus	exon	150084	150148	.	-	.	ID=Dca5193.1.exon5;Parent=Dca5193.1