Carnation DB

Dca52094.1

Annotation

5-exons
f-1
sp|F6HND8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g04710#GO:0000151;GO:0005488;GO:0004842#2F0P1C
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20321524-20323848 FORWARD LENGTH=632
Repeat List (scaffold6815)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52094.1	16	634	640	67.5	619	70	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HND8_VITVI	11	627	628	98.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52094.1	14	633	640	57.5	620	60	0
Target_name	Start	End	Length	Cov(%)
AT3G54850.1	9	627	632	97.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6815	Augus-PASA	mRNA	2442	6300	.	-	.	ID=Dca52094.1;Parent=Dca52094
scaffold6815	Augus-PASA	exon	2442	2837	.	-	.	ID=Dca52094.1.exon1;Parent=Dca52094.1
scaffold6815	Augustus	exon	3222	3914	.	-	.	ID=Dca52094.1.exon2;Parent=Dca52094.1
scaffold6815	Augustus	exon	4272	4685	.	-	.	ID=Dca52094.1.exon3;Parent=Dca52094.1
scaffold6815	Augustus	exon	4775	4891	.	-	.	ID=Dca52094.1.exon4;Parent=Dca52094.1
scaffold6815	Augustus	exon	5998	6300	.	-	.	ID=Dca52094.1.exon5;Parent=Dca52094.1