Carnation DB

Dca52302.1

Annotation

13-exons
f-1
sp|A5C5D0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036820#GO:0005643;GO:0016973#0F1P1C
sp|B9RMT7_RICCO#Nucleoporin GLE1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1083720#GO:0005643;GO:0016973#0F1P1C
Repeat List (scaffold688)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52302.1	168	646	661	37.51	479	49	4e-124
Target_name	Start	End	Length	Cov(%)
sp\|A5C5D0_VITVI	215	716	745	67.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52302.1	184	643	661	29.65	460	41	2e-90
Target_name	Start	End	Length	Cov(%)
AT1G13120.1	144	582	611	71.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold688	Augus-PASA	mRNA	43489	53420	.	-	.	ID=Dca52302.1;Parent=Dca52302
scaffold688	Augus-PASA	exon	43489	43740	.	-	.	ID=Dca52302.1.exon1;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	44081	44203	.	-	.	ID=Dca52302.1.exon2;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	44339	44545	.	-	.	ID=Dca52302.1.exon3;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	44753	44839	.	-	.	ID=Dca52302.1.exon4;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	45172	45253	.	-	.	ID=Dca52302.1.exon5;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	45611	45681	.	-	.	ID=Dca52302.1.exon6;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	46091	46200	.	-	.	ID=Dca52302.1.exon7;Parent=Dca52302.1
scaffold688	Augus-PASA	exon	46739	46916	.	-	.	ID=Dca52302.1.exon8;Parent=Dca52302.1
scaffold688	Augustus	exon	47289	47460	.	-	.	ID=Dca52302.1.exon9;Parent=Dca52302.1
scaffold688	Augustus	exon	47702	47850	.	-	.	ID=Dca52302.1.exon10;Parent=Dca52302.1
scaffold688	Augustus	exon	49673	49735	.	-	.	ID=Dca52302.1.exon11;Parent=Dca52302.1
scaffold688	Augustus	exon	50214	50369	.	-	.	ID=Dca52302.1.exon12;Parent=Dca52302.1
scaffold688	Augustus	exon	53085	53420	.	-	.	ID=Dca52302.1.exon13;Parent=Dca52302.1