Dca52307.1
Annotation
- 2-exons
- f-1
- sp|Q2QUJ4_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g16060#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold688)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52307.1 |
1 |
186 |
189 |
69.31 |
186 |
61 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QUJ4_ORYSJ |
792 |
1006 |
1050 |
20.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold688 |
Augustus |
mRNA |
117131 |
117773 |
. |
- |
. |
ID=Dca52307.1;Parent=Dca52307 |
| scaffold688 |
Augustus |
exon |
117131 |
117312 |
. |
- |
. |
ID=Dca52307.1.exon1;Parent=Dca52307.1 |
| scaffold688 |
Augustus |
exon |
117386 |
117773 |
. |
- |
. |
ID=Dca52307.1.exon2;Parent=Dca52307.1 |
