Dca52381.1
Annotation
- 3-exons
- f-1
- sp|F6H779_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01850#GO:0005634;GO:0004842;GO:0008270;GO:0007275;GO:0006511#2F2P1C
- AT4G27880.1 | Symbols: | Protein with RING/U-box and TRAF-like domains | chr4:13883623-13884927 FORWARD LENGTH=327
- Repeat List (scaffold69)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52381.1 |
1 |
316 |
316 |
89.24 |
316 |
87 |
3e-162
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H779_VITVI |
1 |
327 |
327 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52381.1 |
1 |
316 |
316 |
82.59 |
316 |
80 |
5e-155
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G27880.1 |
1 |
326 |
327 |
99.69 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold69 |
Augus-PASA |
mRNA |
183952 |
186881 |
. |
+ |
. |
ID=Dca52381.1;Parent=Dca52381 |
| scaffold69 |
Augus-PASA |
exon |
183952 |
184152 |
. |
+ |
. |
ID=Dca52381.1.exon1;Parent=Dca52381.1 |
| scaffold69 |
Augus-PASA |
exon |
185889 |
186275 |
. |
+ |
. |
ID=Dca52381.1.exon2;Parent=Dca52381.1 |
| scaffold69 |
Augus-PASA |
exon |
186519 |
186881 |
. |
+ |
. |
ID=Dca52381.1.exon3;Parent=Dca52381.1 |
