Dca5240.1
Annotation
- 4-exons
- f-1
- sp|F6I1T9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g00420#GO:0003723#1F0P0C
- sp|G7JWB3_MEDTR#Poly(RC)-binding protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g031720#GO:0003723#1F0P0C
- Repeat List (scaffold12)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5240.1 |
6 |
183 |
345 |
17.68 |
178 |
34 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I1T9_VITVI |
291 |
459 |
648 |
26.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5240.1 |
16 |
132 |
345 |
12.46 |
117 |
36 |
8e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G22600.1 |
276 |
387 |
632 |
17.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12 |
Augus-PASA |
mRNA |
498646 |
502350 |
. |
+ |
. |
ID=Dca5240.1;Parent=Dca5240 |
| scaffold12 |
Augus-PASA |
exon |
498646 |
499146 |
. |
+ |
. |
ID=Dca5240.1.exon1;Parent=Dca5240.1 |
| scaffold12 |
Augustus |
exon |
500110 |
500457 |
. |
+ |
. |
ID=Dca5240.1.exon2;Parent=Dca5240.1 |
| scaffold12 |
Augustus |
exon |
502020 |
502089 |
. |
+ |
. |
ID=Dca5240.1.exon3;Parent=Dca5240.1 |
| scaffold12 |
Augustus |
exon |
502232 |
502350 |
. |
+ |
. |
ID=Dca5240.1.exon4;Parent=Dca5240.1 |
