Dca52438.1
Annotation
- 3-exons
- f-1
- sp|Q8LND0_ORYSJ#Putative transposable element#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0044A10.19#unknown#0F0P0C
- Repeat List (scaffold6906)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52438.1 |
84 |
301 |
301 |
37.2 |
218 |
43 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8LND0_ORYSJ |
214 |
477 |
1022 |
25.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52438.1 |
171 |
295 |
301 |
19.26 |
125 |
37 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0650800-01 |
115 |
272 |
333 |
47.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6906 |
Augustus |
mRNA |
7228 |
8418 |
. |
- |
. |
ID=Dca52438.1;Parent=Dca52438 |
| scaffold6906 |
Augustus |
exon |
7228 |
7484 |
. |
- |
. |
ID=Dca52438.1.exon1;Parent=Dca52438.1 |
| scaffold6906 |
Augustus |
exon |
7584 |
7775 |
. |
- |
. |
ID=Dca52438.1.exon2;Parent=Dca52438.1 |
| scaffold6906 |
Augustus |
exon |
7962 |
8418 |
. |
- |
. |
ID=Dca52438.1.exon3;Parent=Dca52438.1 |
