Carnation DB

Dca52642.1

Annotation

5-exons
f-1
sp|F6I1E7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0045g00630#GO:0005840;GO:0003735;GO:0006412#1F1P1C
AT1G80620.1 | Symbols: | S15/NS1, RNA-binding protein | chr1:30305404-30307182 FORWARD LENGTH=414
Repeat List (scaffold6968)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52642.1	65	422	423	41.37	358	46	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|F6I1E7_VITVI	96	444	444	78.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52642.1	54	421	423	38.77	368	43	2e-63
Target_name	Start	End	Length	Cov(%)
AT1G80620.1	79	413	414	80.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6968	Augus-PASA	mRNA	10178	12906	.	-	.	ID=Dca52642.1;Parent=Dca52642
scaffold6968	Augus-PASA	exon	10178	10324	.	-	.	ID=Dca52642.1.exon1;Parent=Dca52642.1
scaffold6968	Augus-PASA	exon	10630	10682	.	-	.	ID=Dca52642.1.exon2;Parent=Dca52642.1
scaffold6968	Augus-PASA	exon	10969	11080	.	-	.	ID=Dca52642.1.exon3;Parent=Dca52642.1
scaffold6968	Augus-PASA	exon	11223	11284	.	-	.	ID=Dca52642.1.exon4;Parent=Dca52642.1
scaffold6968	Augus-PASA	exon	12009	12906	.	-	.	ID=Dca52642.1.exon5;Parent=Dca52642.1