Carnation DB

Dca52914.1

Annotation

17-exons
f-1
sp|E0CSG1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02210#GO:0044183#1F0P0C
sp|B9T1X0_RICCO#26S proteasome non-ATPase regulatory subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0108610#GO:0000502;GO:0044183#1F0P1C
Repeat List (scaffold70)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52914.1	1	523	523	59.65	523	60	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CSG1_VITVI	1	525	525	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52914.1	8	523	523	53.15	516	51	1e-153
Target_name	Start	End	Length	Cov(%)
AT3G15180.2	3	551	551	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold70	Augus-PASA	mRNA	288209	298747	.	-	.	ID=Dca52914.1;Parent=Dca52914
scaffold70	Augus-PASA	exon	288209	288295	.	-	.	ID=Dca52914.1.exon1;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	288788	288885	.	-	.	ID=Dca52914.1.exon2;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	288988	289102	.	-	.	ID=Dca52914.1.exon3;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	289359	289406	.	-	.	ID=Dca52914.1.exon4;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	289607	289744	.	-	.	ID=Dca52914.1.exon5;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	290393	290490	.	-	.	ID=Dca52914.1.exon6;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	291113	291220	.	-	.	ID=Dca52914.1.exon7;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	292058	292152	.	-	.	ID=Dca52914.1.exon8;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	292369	292442	.	-	.	ID=Dca52914.1.exon9;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	292914	293075	.	-	.	ID=Dca52914.1.exon10;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	293710	293781	.	-	.	ID=Dca52914.1.exon11;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	293900	293966	.	-	.	ID=Dca52914.1.exon12;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	294835	294938	.	-	.	ID=Dca52914.1.exon13;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	295966	296028	.	-	.	ID=Dca52914.1.exon14;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	296957	297065	.	-	.	ID=Dca52914.1.exon15;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	298498	298561	.	-	.	ID=Dca52914.1.exon16;Parent=Dca52914.1
scaffold70	Augus-PASA	exon	298678	298747	.	-	.	ID=Dca52914.1.exon17;Parent=Dca52914.1