Carnation DB

Dca52987.1

Annotation

7-exons
f-1
sp|D7T1T6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0022g02350#unknown#0F0P0C
Os10t0188400-01 Similar to ACI13.
Repeat List (scaffold702)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52987.1	1	250	250	65.2	250	63	6e-82
Target_name	Start	End	Length	Cov(%)
sp\|D7T1T6_VITVI	1	256	256	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52987.1	8	250	250	58.4	243	60	1e-73
Target_name	Start	End	Length	Cov(%)
AT5G51840.1	6	245	245	97.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold702	Augus-PASA	mRNA	16446	20154	.	+	.	ID=Dca52987.1;Parent=Dca52987
scaffold702	Augus-PASA	exon	16446	16538	.	+	.	ID=Dca52987.1.exon1;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	16620	16651	.	+	.	ID=Dca52987.1.exon2;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	17987	18084	.	+	.	ID=Dca52987.1.exon3;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	18480	18562	.	+	.	ID=Dca52987.1.exon4;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	18886	18963	.	+	.	ID=Dca52987.1.exon5;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	19038	19136	.	+	.	ID=Dca52987.1.exon6;Parent=Dca52987.1
scaffold702	Augus-PASA	exon	19885	20154	.	+	.	ID=Dca52987.1.exon7;Parent=Dca52987.1