Carnation DB

Dca52995.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold7021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52995.1	133	431	431	27.37	299	36	1e-51
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	336	665	1110	29.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52995.1	240	431	431	17.16	192	38	8e-32
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	383	576	857	22.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7021	Augustus	mRNA	2043	5681	.	-	.	ID=Dca52995.1;Parent=Dca52995
scaffold7021	Augustus	exon	2043	2602	.	-	.	ID=Dca52995.1.exon1;Parent=Dca52995.1
scaffold7021	Augustus	exon	2695	2942	.	-	.	ID=Dca52995.1.exon2;Parent=Dca52995.1
scaffold7021	Augustus	exon	3583	3713	.	-	.	ID=Dca52995.1.exon3;Parent=Dca52995.1
scaffold7021	Augustus	exon	4003	4125	.	-	.	ID=Dca52995.1.exon4;Parent=Dca52995.1
scaffold7021	Augustus	exon	5448	5681	.	-	.	ID=Dca52995.1.exon5;Parent=Dca52995.1