Carnation DB

Dca52997.1

Annotation

18-exons
f-1
sp|F6HDJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g02170#GO:0016021;GO:0022891#1F0P1C
sp|D7T6L7_VITVI#Putative ERD6-like transporter#Vitis vinifera (Grape)#ORFNames=GSVIVT00019852001#GO:0016021;GO:0022891#1F0P1C
Repeat List (scaffold7023)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52997.1	31	473	473	56.02	443	60	7e-157
Target_name	Start	End	Length	Cov(%)
sp\|F6HDJ1_VITVI	49	491	492	90.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52997.1	5	473	473	54.75	469	55	7e-153
Target_name	Start	End	Length	Cov(%)
AT5G18840.1	4	479	482	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7023	Augus-PASA	mRNA	8182	13972	.	+	.	ID=Dca52997.1;Parent=Dca52997
scaffold7023	Augus-PASA	exon	8182	8346	.	+	.	ID=Dca52997.1.exon1;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	9143	9205	.	+	.	ID=Dca52997.1.exon2;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	9497	9586	.	+	.	ID=Dca52997.1.exon3;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	9705	9764	.	+	.	ID=Dca52997.1.exon4;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	10018	10083	.	+	.	ID=Dca52997.1.exon5;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	10192	10257	.	+	.	ID=Dca52997.1.exon6;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	10474	10549	.	+	.	ID=Dca52997.1.exon7;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	10716	10780	.	+	.	ID=Dca52997.1.exon8;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	10864	10956	.	+	.	ID=Dca52997.1.exon9;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	11675	11755	.	+	.	ID=Dca52997.1.exon10;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	12023	12107	.	+	.	ID=Dca52997.1.exon11;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	12358	12404	.	+	.	ID=Dca52997.1.exon12;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	12833	12895	.	+	.	ID=Dca52997.1.exon13;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	12979	13038	.	+	.	ID=Dca52997.1.exon14;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	13279	13332	.	+	.	ID=Dca52997.1.exon15;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	13442	13501	.	+	.	ID=Dca52997.1.exon16;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	13616	13730	.	+	.	ID=Dca52997.1.exon17;Parent=Dca52997.1
scaffold7023	Augus-PASA	exon	13860	13972	.	+	.	ID=Dca52997.1.exon18;Parent=Dca52997.1